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whole-transcriptome microarray data decipher  (Veracyte Inc)

 
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    Veracyte Inc whole-transcriptome microarray data decipher
    Whole Transcriptome Microarray Data Decipher, supplied by Veracyte Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarrays+transcriptomic+data/whole+transcriptome+decipher+assay/10__1172_slash_jci165718-366-6-7
    Average 90 stars, based on 1 article reviews
    whole-transcriptome microarray data decipher - by Bioz Stars, 2026-09
    90/100 stars

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    ( A ) PCA of global transcriptomic differences. ( B ) Heatmap of globally DEGs when modeled as ~ PDX_ID + RTS. ( C ) Volcano plot of globally DEGs when modeled by ~RTS alone (red text meets cutoffs of log 2 fold change > 2 or < –2, adjusted P < 0.05). ( D ) Circos plot of differentially regulated lncRNAs (red) with their direct DNA binding targets (black) and differentially regulated lncRNAs (blue) with their DNA binding sites.

    Journal: JCI Insight

    Article Title: An in vivo model of glioblastoma radiation resistance identifies long noncoding RNAs and targetable kinases

    doi: 10.1172/jci.insight.148717

    Figure Lengend Snippet: ( A ) PCA of global transcriptomic differences. ( B ) Heatmap of globally DEGs when modeled as ~ PDX_ID + RTS. ( C ) Volcano plot of globally DEGs when modeled by ~RTS alone (red text meets cutoffs of log 2 fold change > 2 or < –2, adjusted P < 0.05). ( D ) Circos plot of differentially regulated lncRNAs (red) with their direct DNA binding targets (black) and differentially regulated lncRNAs (blue) with their DNA binding sites.

    Article Snippet: Of these, existing Affymetrix transcriptomic microarray data were available for 13 PDX lines ( n = 7 sensitive, n = 6 resistant).

    Techniques: Binding Assay